Droplet from test tube illustrating Cyclus dPCR Tool Box for bacteria and fungi testing
Application Notes

Exit the 14-Day Hold: The Qualification Baseline for Rapid dPCR 

Cyclus® dPCR Tool Box Bacteria Fungi


Cyclus® dPCR Tool Box for bacteria and fungi in sterility testing


Polymerase chain reaction (PCR) techniques provide a faster path to sterility results than the compendial culture method by amplifying microbial DNA. However, standard quantitative PCR (qPCR) approaches amplify the entire sample in a single reaction, meaning that ubiquitous bacterial DNA in reagents can elevate the baseline signal beyond a defensible cycle threshold (Ct) cutoff.

Digital PCR (dPCR) isolates background interference using a partition-based architecture that contains trace contaminants in individual nano-wells, allowing teams to establish a statistically grounded limit of blank. This Sartorius application note provides the experimental data to evaluate that baseline for the Cyclus® dPCR Tool Box, demonstrating detection at approximately 10 CFU/mL.

Download the application note to:

  • Review the mathematical baseline required to differentiate true sample signals from inherent reagent noise
  • Evaluate detection performance against compendial bacterial and fungal targets relevant under EP 2.6.27
  • Examine how partition-based architecture prevents ambient environmental DNA from inflating bulk readings

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